STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_14447TBC1 domain family member 10B. (413 aa)    
Predicted Functional Partners:
T09_7427
Ras-related protein Rab-35.
   
 0.871
T09_8289
Ras-related protein Rab-11A.
     
 0.522
T09_15191
TBC1 domain family member 13.
      
 0.508
T09_12493
Ras-related C3 botulinum toxin substrate 1.
    
 0.480
T09_1999
Uncharacterized protein.
     
 0.478
T09_7071
GTP-binding protein Rheb.
     
 0.478
T09_983
Ras-like protein family member 10B.
     
 0.478
T09_11314
Ras-related protein Rab-14.
     
 0.478
T09_14975
Ras-related protein Rab-14.
     
 0.478
T09_5409
Rho-related GTP-binding protein RhoU.
    
 0.473
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.