STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_12406Transcription factor AP-2-alpha. (355 aa)    
Predicted Functional Partners:
kctd15
BTB/POZ domain-containing protein kctd15.
    
 0.819
T09_14216
BTB/POZ domain-containing protein KCTD16.
   
 0.703
T09_11626
WW domain-containing oxidoreductase.
    
 0.703
T09_381
BTB/POZ domain-containing protein KCTD16.
   
 0.703
T09_15516
BTB/POZ domain-containing protein KCTD8.
   
 0.703
T09_5214
Max dimerization protein 3.
    
 0.636
ube2ia
SUMO-conjugating enzyme UBC9-A.
    
  0.627
ube2ia-2
SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.627
ube2ia-4
SUMO-conjugating enzyme UBC9-A; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.627
T09_1420
Lysine-specific demethylase 5A.
    
 0.613
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.