STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_9709ATP synthase subunit b, mitochondrial. (270 aa)    
Predicted Functional Partners:
T09_1496
ATP synthase subunit gamma.
   
 0.999
T09_8283
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.999
T09_1547
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.999
T09_10462
ATP synthase subunit delta, mitochondrial.
   
 0.999
T09_13646
ATP synthase F(0) complex subunit C2, mitochondrial; Belongs to the ATPase C chain family.
   
 0.999
T09_13037
ATP synthase subunit O, mitochondrial.
   
 0.999
T09_144
Lysine-specific demethylase 6A.
   
 0.980
T09_1675
Protein disulfide-isomerase.
    
 0.968
T09_3338
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
 0.963
T09_9941
V-type proton ATPase 21 kDa proteolipid subunit.
   
 0.963
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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