STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_13881Chitinase domain-containing protein 1; Belongs to the glycosyl hydrolase 18 family. (382 aa)    
Predicted Functional Partners:
T09_781
Uncharacterized protein.
    
 
 0.604
T09_10551
Meiotic recombination protein REC8-like protein.
    
 
 0.604
hsp-6
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
    
   0.545
T09_1280
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.545
T09_6619
UPF0468 protein C16orf80.
    
 
 0.545
mig-10
Abnormal cell migration protein 10.
    
   0.545
T09_2643
Coatomer subunit epsilon.
   
    0.525
slc35b4
UDP-xylose and UDP-N-acetylglucosamine transporter.
      
 0.508
T09_12906
Muscle-specific protein 20.
    
 
 0.507
T09_7727
Transgelin; Belongs to the calponin family.
    
 
 0.507
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
Server load: low (22%) [HD]