STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_15374Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
T09_6237
4-aminobutyrate aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.623
T09_15836
NADPH:adrenodoxin oxidoreductase, mitochondrial.
   
 
  0.565
T09_7433
Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.561
T09_13364
Glutamate synthase [NADH], amyloplastic; Belongs to the actin family.
   
 
  0.560
slgA
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.545
T09_15133
Glutamine synthetase.
     
 0.541
T09_7351
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
    
 0.530
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.