STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_59Histidine triad nucleotide-binding protein 1. (336 aa)    
Predicted Functional Partners:
tbp-1
TATA-box-binding protein.
   
 0.868
T09_1773
Putative sulfite oxidase, mitochondrial.
  
  0.848
T09_15700
Acidic repeat-containing protein.
    
 0.805
T09_15774
TATA box-binding protein-like protein 1.
   
 0.795
ndx-4
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical].
  
 0.795
flad1
FAD synthase.
    
  0.794
T09_10532
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2.
    
 0.792
T09_9372
Cyclin-dependent kinase 7.
    
 0.788
T09_8501
3'(2'),5'-bisphosphate nucleotidase 1.
    
  0.787
T09_14589
CDK-activating kinase assembly factor MAT1.
    
 0.768
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.