STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnot11Nuclear pore glycoprotein p62. (901 aa)    
Predicted Functional Partners:
T09_15385
Nuclear pore complex protein Nup54.
   
 0.999
T09_2907
Nuclear pore complex protein Nup93.
   
 0.998
T09_6844
Nuclear pore complex protein.
   
 0.996
T09_10649
Nuclear pore complex protein.
   
 0.995
T09_3931
Nuclear pore complex protein Nup88.
    
 0.994
T09_6640
Nuclear pore complex protein Nup98-Nup96.
   
0.994
T09_7702
Nucleoporin p58/p45.
   
 0.991
T09_13449
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.981
T09_4192
Nuclear pore complex protein.
   
 0.981
T09_14175
Uncharacterized protein.
   
 0.979
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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