STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_5645T-complex protein 1 subunit theta. (1331 aa)    
Predicted Functional Partners:
T09_4701
40S ribosomal protein S6.
    
  0.999
T09_13465
Protein LTV1-like protein.
   
 0.999
T09_5066
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.998
T09_11283
RRP12-like protein.
   
 
 0.998
T09_3418
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.998
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.997
T09_5129
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.995
T09_13116
40S ribosomal protein S3.
    
 0.994
rps20
40S ribosomal protein S20.
    
 0.992
T09_7093
Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily.
    
 0.992
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.