STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascc3Activating signal cointegrator 1 complex subunit 3. (1338 aa)    
Predicted Functional Partners:
T09_7020
Pre-mRNA-processing-splicing factor 8.
   
 0.987
T09_1228
Pre-mRNA-processing factor 6.
   
 0.976
snr-4
Small nuclear ribonucleoprotein Sm D2.
   
 0.953
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.951
T09_7985
Translocation protein SEC63-like protein.
     
 0.949
T09_7285
Putative small nuclear ribonucleoprotein F.
   
 0.945
snr-7
Small nuclear ribonucleoprotein G.
   
  0.944
T09_1333
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.943
T09_13198
Thioredoxin-like protein 4A.
    
 0.942
prpf31
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.935
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.