STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_11937Transcription factor SOX-14. (382 aa)    
Predicted Functional Partners:
pou3f2-a
POU domain protein.
  
 
 0.754
T09_12282
Runt-related transcription factor 1.
   
 0.752
pan
Protein pangolin, isoforms A/H/I/S.
    
0.743
T09_398
Transcription factor SOX-6.
  
 
0.732
arm
Armadillo segment polarity protein.
    
 0.730
arm-2
Armadillo segment polarity protein.
    
 0.730
nhr-25
Nuclear hormone receptor family member nhr-25.
    
 0.710
T09_13811
Sal-like protein 1.
    
 0.664
T09_2747
PR domain zinc finger protein 14.
    
 0.647
T09_2281
Uridine kinase; Belongs to the uridine kinase family.
    
 0.630
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.