STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_314460S ribosomal protein L8. (259 aa)    
Predicted Functional Partners:
T09_1534
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
T09_14235
60S ribosomal protein L5.
  
 0.999
T09_7787
60S ribosomal protein L21.
   
 0.999
T09_5247
40S ribosomal protein S19S.
   
 
 0.999
rps20
40S ribosomal protein S20.
  
 
 0.999
T09_15521
Guanine nucleotide-binding protein subunit beta-2-like 1.
   
 
 0.999
T09_1416
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 
 0.999
T09_8016
Ubiquitin-60S ribosomal protein L40.
   
 0.999
T09_7265
60S ribosomal protein L30.
  
 0.999
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.