STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_14730Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (854 aa)    
Predicted Functional Partners:
ilvbl
Acetolactate synthase-like protein; Belongs to the TPP enzyme family.
  
 0.971
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.940
cth-2
Putative cystathionine gamma-lyase 2.
  
 0.937
T09_8786
Uncharacterized protein.
    
 0.932
T09_4835
Bifunctional glutamate/proline--tRNA ligase.
  
 0.928
T09_6237
4-aminobutyrate aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.928
T09_9292
Folylpolyglutamate synthase, mitochondrial.
    
 0.923
T09_4467
Transcription factor BTF3; Belongs to the NAC-beta family.
    
 0.921
T09_9422
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
  
 0.918
T09_12565
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.917
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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