STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_10429Aminopeptidase N. (1089 aa)    
Predicted Functional Partners:
T09_9052
Cytosolic non-specific dipeptidase.
   
 0.735
gsk3b
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.734
T09_12995
Aspartate aminotransferase.
   
 0.717
got2
Aspartate aminotransferase.
   
 0.717
dld-1
Dihydrolipoyl dehydrogenase.
  
 0.710
T09_13514
Thioredoxin reductase 1, cytoplasmic; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.704
T09_6706
Thioredoxin reductase 2, mitochondrial; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.704
T09_5255
Putative aminopeptidase W07G4.4.
  
 0.672
sseA
3-mercaptopyruvate sulfurtransferase.
  
 
 0.659
T09_8755
Cystathionine beta-synthase.
    
 0.644
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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