STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_3944Solute carrier family 35 member E1. (403 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.732
T09_4936
F-box/WD repeat-containing protein 1A.
   
 
  0.566
T09_15552
Interleukin-17A.
      
 0.551
slc35c1
GDP-fucose transporter 1.
      
 0.543
T09_15375
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
 
 0.528
slc35b4
UDP-xylose and UDP-N-acetylglucosamine transporter.
      
 0.507
T09_2488
Solute carrier family 35 member C2.
      
 0.491
T09_13449
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.483
T09_12069
Solute carrier family 35 member F6.
      
 0.483
T09_14642
Ras-related protein Rab-1A.
   
 
 0.462
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.