STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_2877Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
ran-4
Putative nuclear transport factor 2.
    
 0.828
T09_10413
E3 ubiquitin-protein ligase FANCL.
    
 0.750
T09_13038
Suppressor of hairless protein.
    
 0.743
T09_328
39S ribosomal protein L1, mitochondrial.
    
  0.718
gro2
Transducin-like enhancer protein 3.
    
 0.686
T09_5001
Period circadian-like protein 3.
    
 0.675
T09_9050
Fanconi anemia group D2 protein.
     
 0.643
T09_12699
Uncharacterized protein.
    
 0.612
T09_4199
Achaete-scute-like protein 4.
   
 
 0.564
oxt
Xylosyltransferase oxt.
     
 0.546
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.