STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_6731Uncharacterized protein. (690 aa)    
Predicted Functional Partners:
T09_3035
Chromatin assembly factor 1 subunit B.
   
 
 0.966
asf1
Histone chaperone asf1.
   
 
 0.860
mcm5
DNA helicase; Belongs to the MCM family.
   
  
 0.826
T09_8131
DNA helicase; Belongs to the MCM family.
   
 
 0.803
T09_2639
DNA helicase; Belongs to the MCM family.
   
  
 0.762
pola1
DNA polymerase.
   
 
 0.738
T09_9163
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.726
T09_612
DNA helicase; Belongs to the MCM family.
   
 
 0.712
T09_260
Chromo domain protein LHP1.
    
 
 0.671
T09_3174
Chromobox-like protein 1.
    
 
 0.671
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.