STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900083545_00064Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_900083545_02259
Unannotated protein.
    
  0.998
GCA_900083545_00063
Unannotated protein.
 
  
 0.902
GCA_900083545_00997
Unannotated protein.
    
 0.813
GCA_900083545_00049
Unannotated protein.
 
 
 0.780
GCA_900083545_01512
Unannotated protein.
  
  
 0.774
GCA_900083545_00887
Unannotated protein.
    
  0.759
GCA_900083545_00988
Unannotated protein.
    
 0.690
GCA_900083545_02535
Unannotated protein.
    
 0.690
GCA_900083545_01199
Unannotated protein.
  
 
  0.683
GCA_900083545_02155
Unannotated protein.
  
 
  0.683
Your Current Organism:
Alistipes provencensis
NCBI taxonomy Id: 1816676
Other names: A. provencensis, Alistipes sp. Marseille-P2431, CSUR P2431, DSM 102308, strain Marseille-P2431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.