STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900087015_00230Unannotated protein. (654 aa)    
Predicted Functional Partners:
GCA_900087015_00231
Unannotated protein.
 
  
 0.935
GCA_900087015_00557
Unannotated protein.
  
 
 0.929
GCA_900087015_01943
Unannotated protein.
     
 0.494
GCA_900087015_01942
Unannotated protein.
     
 0.489
GCA_900087015_00768
Unannotated protein.
  
  
 0.483
GCA_900087015_01939
Unannotated protein.
   
 
 0.482
GCA_900087015_01944
Unannotated protein.
     
 0.482
GCA_900087015_00232
Unannotated protein.
       0.481
GCA_900087015_01972
Unannotated protein.
 
 
 0.461
GCA_900087015_01940
Unannotated protein.
     
 0.454
Your Current Organism:
Christensenella timonensis
NCBI taxonomy Id: 1816678
Other names: C. timonensis, CSUR P2437, Christensenella sp. Marseille-P2437, DSM 102800, strain Marseille-P2437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.