STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089075_00074Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_900089075_01091
Unannotated protein.
    
  0.924
GCA_900089075_01444
Unannotated protein.
  
 0.914
GCA_900089075_00073
Unannotated protein.
 
     0.899
GCA_900089075_02168
Unannotated protein.
 
 
  0.856
GCA_900089075_00241
Unannotated protein.
  
 
 0.845
GCA_900089075_01347
Unannotated protein.
  
0.809
GCA_900089075_00266
Unannotated protein.
  
  
  0.801
GCA_900089075_01110
Unannotated protein.
  
 
  0.778
GCA_900089075_00591
Unannotated protein.
  
  
 
0.759
GCA_900089075_02026
Unannotated protein.
  
 
 
0.755
Your Current Organism:
Vaginella massiliensis
NCBI taxonomy Id: 1816680
Other names: CSUR P2517, DSM 102346, V. massiliensis, Weeksella sp. Marseille-P2517, strain Marseille-P2517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.