STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089075_00254Unannotated protein. (413 aa)    
Predicted Functional Partners:
GCA_900089075_00488
Unannotated protein.
  
 
 0.899
GCA_900089075_00249
Unannotated protein.
 
     0.898
GCA_900089075_00237
Unannotated protein.
 
     0.886
GCA_900089075_00238
Unannotated protein.
 
   
 0.882
GCA_900089075_00235
Unannotated protein.
 
   
 0.880
GCA_900089075_00246
Unannotated protein.
 
     0.879
GCA_900089075_00233
Unannotated protein.
 
   
 0.874
GCA_900089075_00245
Unannotated protein.
 
     0.873
GCA_900089075_00232
Unannotated protein.
 
   
 0.850
GCA_900089075_00229
Unannotated protein.
 
     0.846
Your Current Organism:
Vaginella massiliensis
NCBI taxonomy Id: 1816680
Other names: CSUR P2517, DSM 102346, V. massiliensis, Weeksella sp. Marseille-P2517, strain Marseille-P2517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.