STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089075_00461Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_900089075_01070
Unannotated protein.
  
  
 0.663
GCA_900089075_00460
Unannotated protein.
  
    0.576
GCA_900089075_02020
Unannotated protein.
  
 
  0.552
GCA_900089075_02140
Unannotated protein.
  
 
 0.521
GCA_900089075_00793
Unannotated protein.
   
 
  0.517
GCA_900089075_00459
Unannotated protein.
       0.516
GCA_900089075_00462
Unannotated protein.
       0.506
GCA_900089075_00159
Unannotated protein.
   
 
  0.488
GCA_900089075_00453
Unannotated protein.
   
   0.485
GCA_900089075_00456
Unannotated protein.
       0.481
Your Current Organism:
Vaginella massiliensis
NCBI taxonomy Id: 1816680
Other names: CSUR P2517, DSM 102346, V. massiliensis, Weeksella sp. Marseille-P2517, strain Marseille-P2517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.