STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089075_01047Unannotated protein. (331 aa)    
Predicted Functional Partners:
GCA_900089075_01046
Unannotated protein.
 
     0.950
GCA_900089075_00050
Unannotated protein.
     
 0.913
GCA_900089075_02043
Unannotated protein.
     
 0.910
GCA_900089075_01576
Unannotated protein.
     
 0.907
GCA_900089075_00792
Unannotated protein.
    
  0.650
GCA_900089075_01104
Unannotated protein.
   
 
 0.589
GCA_900089075_01048
Unannotated protein.
       0.486
GCA_900089075_00199
Unannotated protein.
 
  
  0.465
GCA_900089075_01433
Unannotated protein.
    
 0.443
GCA_900089075_02173
Unannotated protein.
    
 0.428
Your Current Organism:
Vaginella massiliensis
NCBI taxonomy Id: 1816680
Other names: CSUR P2517, DSM 102346, V. massiliensis, Weeksella sp. Marseille-P2517, strain Marseille-P2517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.