STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169525_00058Unannotated protein. (277 aa)    
Predicted Functional Partners:
GCA_900169525_00056
Unannotated protein.
 
 0.999
GCA_900169525_00057
Unannotated protein.
 
 0.999
GCA_900169525_02426
Unannotated protein.
 
 0.998
GCA_900169525_02427
Unannotated protein.
 
 0.997
GCA_900169525_02425
Unannotated protein.
  
  
 
0.918
GCA_900169525_00055
Unannotated protein.
       0.785
GCA_900169525_00250
Unannotated protein.
   
 
  0.673
GCA_900169525_00325
Unannotated protein.
   
  0.645
GCA_900169525_01864
Unannotated protein.
   
  0.645
GCA_900169525_02565
Unannotated protein.
   
  0.645
Your Current Organism:
Corynebacterium pacaense
NCBI taxonomy Id: 1816684
Other names: C. pacaense, CSUR P2417, Corynebacterium sp. Marseille-P2417, strain Marseille-P2417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.