STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169525_01399Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_900169525_01400
Unannotated protein.
       0.539
GCA_900169525_01294
Unannotated protein.
  
     0.519
GCA_900169525_01401
Unannotated protein.
       0.468
GCA_900169525_02648
Unannotated protein.
      
 0.467
GCA_900169525_01392
Unannotated protein.
  
  
 0.456
GCA_900169525_01402
Unannotated protein.
       0.431
GCA_900169525_02721
Unannotated protein.
  
     0.408
Your Current Organism:
Corynebacterium pacaense
NCBI taxonomy Id: 1816684
Other names: C. pacaense, CSUR P2417, Corynebacterium sp. Marseille-P2417, strain Marseille-P2417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.