STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086605_03628Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_900086605_03359
Unannotated protein.
    
 0.851
GCA_900086605_03358
Unannotated protein.
    
 0.846
GCA_900086605_02559
Unannotated protein.
    
 0.808
GCA_900086605_03627
Unannotated protein.
    
  0.795
GCA_900086605_00820
Unannotated protein.
  
  
 0.772
GCA_900086605_01389
Unannotated protein.
   
 0.767
GCA_900086605_00935
Unannotated protein.
  
 
 0.735
GCA_900086605_02846
Unannotated protein.
  
 
 0.735
GCA_900086605_01321
Unannotated protein.
   
   0.611
GCA_900086605_00452
Unannotated protein.
   
   0.602
Your Current Organism:
Ruminococcus sp. MarseilleP328
NCBI taxonomy Id: 1816688
Other names: R. sp. Marseille-P328, Ruminococcus sp. Marseille-P328
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.