STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086625_02322Unannotated protein. (227 aa)    
Predicted Functional Partners:
GCA_900086625_02319
Unannotated protein.
 
    0.948
GCA_900086625_02317
Unannotated protein.
 
     0.941
GCA_900086625_02316
Unannotated protein.
 
     0.937
GCA_900086625_02315
Unannotated protein.
 
     0.928
GCA_900086625_02314
Unannotated protein.
 
     0.889
GCA_900086625_02327
Unannotated protein.
 
    0.873
GCA_900086625_02313
Unannotated protein.
 
     0.870
GCA_900086625_02326
Unannotated protein.
 
     0.847
GCA_900086625_02323
Unannotated protein.
 
     0.827
GCA_900086625_02321
Unannotated protein.
 
     0.825
Your Current Organism:
Clostridium sp. MarseilleP2538
NCBI taxonomy Id: 1816694
Other names: C. sp. Marseille-P2538, Clostridium sp. Marseille-P2538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.