STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A2140_05345Cytochrome C oxidase Cbb3; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
OGI39223.1
Sulfite reductase, dissimilatory-type beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.880
OGI40098.1
Sulfur relay protein DsrC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OGI39224.1
Sulfur relay protein DsrC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OGI40047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OGI39872.1
Sulfite reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OGI40053.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
OGI41280.1
Sulfurtransferase TusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.693
OGI41514.1
Adenylyl-sulfate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.587
A2140_08275
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.567
A2140_06725
Glutamate synthase; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.540
Your Current Organism:
Muproteobacteria bacterium RBG166213
NCBI taxonomy Id: 1817756
Other names: C. Muproteobacteria bacterium RBG_16_62_13, Candidatus Muproteobacteria bacterium RBG_16_62_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.