STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A2140_08525Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
OGI37649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.973
OGI40025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.962
OGI39783.1
Involved in pteridine salvage and antifolate resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.945
OGI41613.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.932
OGI39600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.924
OGI41283.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.924
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.915
OGI40071.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.912
A2140_02020
Hypothetical protein; Too many ambiguous residues; incomplete; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.912
OGI41031.1
Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.888
Your Current Organism:
Muproteobacteria bacterium RBG166213
NCBI taxonomy Id: 1817756
Other names: C. Muproteobacteria bacterium RBG_16_62_13, Candidatus Muproteobacteria bacterium RBG_16_62_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.