OGH06923.1 protein (Lambdaproteobacteria bacterium RIFOXYD1FULL5627)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

OGH06923.1

30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)

Predicted Functional Partners:

OGH08580.1

0.998

OGH08581.1

0.998

OGH08591.1

0.998

OGH08603.1

0.998

OGH08607.1

0.998

OGH09950.1

0.998

OGH07494.1

0.998

OGH07044.1

0.997

OGH08598.1

0.997

OGH08604.1

0.997

Your Current Organism:

Lambdaproteobacteria bacterium RIFOXYD1FULL5627

NCBI taxonomy Id: 1817770
Other names: C. Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27, Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OGH06923.1	OGH07044.1	A2600_01360	A2600_00515	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OGH06923.1	OGH07494.1	A2600_01360	A2600_08205	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OGH06923.1	OGH08580.1	A2600_01360	A2600_02045	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OGH06923.1	OGH08581.1	A2600_01360	A2600_02050	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OGH06923.1	OGH08591.1	A2600_01360	A2600_02100	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OGH06923.1	OGH08598.1	A2600_01360	A2600_02135	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OGH06923.1	OGH08603.1	A2600_01360	A2600_02160	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OGH06923.1	OGH08604.1	A2600_01360	A2600_02165	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OGH06923.1	OGH08607.1	A2600_01360	A2600_02180	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OGH06923.1	OGH09950.1	A2600_01360	A2600_05200	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
OGH07044.1	OGH06923.1	A2600_00515	A2600_01360	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OGH07044.1	OGH07494.1	A2600_00515	A2600_08205	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08580.1	A2600_00515	A2600_02045	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08581.1	A2600_00515	A2600_02050	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08591.1	A2600_00515	A2600_02100	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08598.1	A2600_00515	A2600_02135	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08603.1	A2600_00515	A2600_02160	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08604.1	A2600_00515	A2600_02165	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH08607.1	A2600_00515	A2600_02180	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OGH07044.1	OGH09950.1	A2600_00515	A2600_05200	30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999

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