STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH06929.1Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)    
Predicted Functional Partners:
OGH08606.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.886
OGH10062.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.886
OGH09332.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.861
OGH08417.1
Ribonuclease PH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.846
OGH07831.1
3-isopropylmalate dehydratase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.795
OGH08045.1
Ketol-acid reductoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.772
OGH09971.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.748
OGH06550.1
Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
OGH06930.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
OGH08552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.727
Your Current Organism:
Lambdaproteobacteria bacterium RIFOXYD1FULL5627
NCBI taxonomy Id: 1817770
Other names: C. Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27, Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.