STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH09401.1asparagine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)    
Predicted Functional Partners:
OGH06178.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OGH06517.1
aspartyl/glutamyl-tRNA amidotransferase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGH10093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.994
OGH07823.1
leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
OGH09319.1
arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
OGH09147.1
glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OGH09995.1
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
OGH07838.1
tRNA glutamyl-Q(34) synthetase GluQRS; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.985
OGH09185.1
Glutathione S-transferase; Catalyzes the formation of 2,4-dinitrophenyl-S-glutathione from 1-chloro-2,4-dinitrobenzene and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.971
OGH06928.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.965
Your Current Organism:
Lambdaproteobacteria bacterium RIFOXYD1FULL5627
NCBI taxonomy Id: 1817770
Other names: C. Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27, Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27
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