STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH07326.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)    
Predicted Functional Partners:
OGH09068.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.923
OGH07672.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.890
OGH07291.1
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.886
OGH09489.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.880
OGH08864.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.867
OGH08592.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.865
OGH09284.1
Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.855
OGH09525.1
Ribosome biogenesis GTP-binding protein YsxC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.850
OGH07488.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.849
OGH09348.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.848
Your Current Organism:
Lambdaproteobacteria bacterium RIFOXYD1FULL5627
NCBI taxonomy Id: 1817770
Other names: C. Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27, Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.