STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH06681.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (243 aa)    
Predicted Functional Partners:
OGH07865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.746
OGH06686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.596
OGH06680.1
Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.596
OGH07249.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.583
OGH09234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.557
OGH06295.1
acetyl-CoA carboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.536
OGH06687.1
dUTP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
OGH08052.1
acetyl-CoA carboxylase biotin carboxylase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.494
OGH08495.1
Type II secretion system protein GspD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.472
OGH06679.1
tyrosine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
Your Current Organism:
Lambdaproteobacteria bacterium RIFOXYD1FULL5627
NCBI taxonomy Id: 1817770
Other names: C. Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27, Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.