STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH07678.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (192 aa)    
Predicted Functional Partners:
A2600_09690
tRNA-Lys; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.786
OGH07679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGH09847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.748
OGH06884.1
long-chain-fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.695
OGH09521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.671
OGH08794.1
Glutamate formimidoyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
  0.627
OGH09939.1
Methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.626
OGH07677.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.615
OGH06893.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.608
OGH06662.1
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.602
Your Current Organism:
Lambdaproteobacteria bacterium RIFOXYD1FULL5627
NCBI taxonomy Id: 1817770
Other names: C. Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27, Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.