STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGD73897.1Methyl-viologen-reducing hydrogenase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
A2Y64_07275
Pyridine nucleotide-disulfide oxidoreductase; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
OGD73901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.998
OGD74590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.975
A2Y64_02910
4Fe-4S ferredoxin; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.974
OGD73896.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.944
OGD76802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.933
OGD73902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OGD74737.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.921
OGD76801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.881
OGD73903.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.821
Your Current Organism:
Coatesbacteria bacterium RBG136614
NCBI taxonomy Id: 1817816
Other names: C. Coatesbacteria bacterium RBG_13_66_14, Candidatus Coatesbacteria bacterium RBG_13_66_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.