STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGE83368.1tRNA (guanosine(37)-N1)-methyltransferase TrmD; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
OGE83369.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
A2Y39_00880
Signal recognition particle protein; Too many ambiguous residues; incomplete; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.993
OGE83367.1
16S rRNA processing protein RimM; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.987
OGE85925.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.924
OGE85927.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.924
OGE85943.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.924
OGE85923.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.923
OGE85926.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.923
OGE85948.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.912
OGE85924.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.906
Your Current Organism:
Delongbacteria bacterium GWF24014
NCBI taxonomy Id: 1817817
Other names: C. Delongbacteria bacterium GWF2_40_14, Candidatus Delongbacteria bacterium GWF2_40_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.