STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGE81678.1Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)    
Predicted Functional Partners:
OGE83940.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.981
OGE81676.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.888
OGE83939.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.851
OGE81644.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.832
OGE81949.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.822
OGE83942.1
UDP-N-acetylmuramate--L-alanine ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.779
OGE81677.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGE84500.1
phospho-N-acetylmuramoyl-pentapeptide- transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.738
OGE83943.1
UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.715
OGE81679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
Your Current Organism:
Delongbacteria bacterium GWF24014
NCBI taxonomy Id: 1817817
Other names: C. Delongbacteria bacterium GWF2_40_14, Candidatus Delongbacteria bacterium GWF2_40_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.