STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGE84623.1Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
OGE84624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
A2Y39_03895
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.726
A2Y39_00060
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.719
OGE84622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.714
OGE82189.1
dTMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.699
OGE83934.1
UMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.665
OGE82257.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.630
OGE84421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.584
OGE84627.1
23S rRNA (adenine(2503)-C(2))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.579
OGE81992.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.578
Your Current Organism:
Delongbacteria bacterium GWF24014
NCBI taxonomy Id: 1817817
Other names: C. Delongbacteria bacterium GWF2_40_14, Candidatus Delongbacteria bacterium GWF2_40_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.