STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A2Y39_05410Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (517 aa)    
Predicted Functional Partners:
OGE84110.1
tRNA 4-thiouridine(8) synthase ThiI; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGE84111.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.693
OGE84696.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.591
OGE81640.1
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.536
OGE83154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.452
OGE82213.1
Outer membrane protein assembly factor BamA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.450
OGE84359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.449
OGE82280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.447
OGE84734.1
Outer membrane protein assembly factor BamA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.424
OGE84465.1
Signal peptidase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.414
Your Current Organism:
Delongbacteria bacterium GWF24014
NCBI taxonomy Id: 1817817
Other names: C. Delongbacteria bacterium GWF2_40_14, Candidatus Delongbacteria bacterium GWF2_40_14
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