STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGE73814.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
OGE74283.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
  0.816
OGE73883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DEAD box helicase family.
    
  0.628
OGE74183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.620
OGE73742.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.616
OGE74409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.609
OGE73647.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.551
OGE73830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
  0.531
OGE73648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family. ECF subfamily.
       0.475
Your Current Organism:
Doudnabacteria bacterium RIFCSPHIGHO201FULL4186
NCBI taxonomy Id: 1817821
Other names: C. Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_41_86, Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_41_86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.