STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF11839.1Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
OGF11838.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
OGF11837.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
OGF11841.1
Translation initiation factor IF-1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.975
OGF11835.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.972
OGF11840.1
Type I methionyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
OGF11844.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
OGF11836.1
50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.969
OGF11080.1
Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
OGF11830.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
OGF11843.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.965
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.