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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF11407.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (576 aa)    
Predicted Functional Partners:
OGF11644.1
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGF12468.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
OGF09849.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.979
OGF10617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.976
OGF11406.1
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
OGF11247.1
Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.890
OGF12538.1
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.883
OGF10962.1
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.878
OGF10991.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.874
OGF10221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.874
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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