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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF11535.1tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
OGF11534.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
OGF11315.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
OGF11533.1
Ribosomal-protein-alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.906
OGF11652.1
Thiamine-phosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.869
OGF10992.1
threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.843
OGF12407.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.823
OGF11532.1
23S rRNA (uracil-5-)-methyltransferase RumA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.787
OGF11537.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
OGF11531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGF11536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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