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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF11770.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)    
Predicted Functional Partners:
OGF09639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.990
OGF12385.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.970
OGF09610.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.953
OGF12393.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.951
OGF12445.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.951
OGF11099.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.951
OGF11018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.947
A3K15_02260
50S ribosomal protein L29; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.931
OGF11679.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.925
OGF09612.1
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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