STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF09563.1Heterodisulfide reductase, subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
OGF09560.1
Disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGF09559.1
Methyl-viologen-reducing hydrogenase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OGF10245.1
Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
OGF09558.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
OGF09562.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.967
OGF09561.1
Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.925
OGF09895.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.869
A3K15_08605
succinate--CoA ligase subunit alpha; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.841
OGF09557.1
F420-nonreducing hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.818
OGF10864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.770
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.