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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF09866.13-isopropylmalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
OGF09860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGF09861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.996
OGF09566.1
succinate--CoA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
OGF09565.1
succinate--CoA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
OGF12438.1
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.873
OGF12633.1
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.869
OGF09518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.838
OGF10243.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.787
OGF10737.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.762
OGF12501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.728
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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