STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF09887.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)    
Predicted Functional Partners:
OGF09888.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.776
OGF11044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.742
OGF10967.1
4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.730
OGF09886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.722
OGF09885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.718
OGF09889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.714
OGF09946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.700
OGF11578.1
cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.675
OGF10706.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.664
OGF09890.1
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.