STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF09924.1Tol-pal system protein YbgF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (246 aa)    
Predicted Functional Partners:
OGF09925.1
Peptidoglycan-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.902
OGF09926.1
Tol-Pal system beta propeller repeat protein TolB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.889
OGF09928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.741
OGF09927.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.655
OGF10269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.641
OGF11416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.620
OGF12477.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
OGF11405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.498
OGF12504.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.464
OGF09922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.459
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.