STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF10204.116S rRNA processing protein RimM; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (174 aa)    
Predicted Functional Partners:
OGF10291.1
tRNA (guanosine(37)-N1)-methyltransferase TrmD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
OGF10202.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.977
OGF10205.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.976
OGF11677.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.939
OGF11679.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.935
OGF11550.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  
 0.934
OGF10890.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.932
OGF11821.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.924
OGF10883.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.924
OGF11820.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.923
Your Current Organism:
Edwardsbacteria bacterium GWE25412
NCBI taxonomy Id: 1817850
Other names: C. Edwardsbacteria bacterium GWE2_54_12, Candidatus Edwardsbacteria bacterium GWE2_54_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.