STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGF12287.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (171 aa)    
Predicted Functional Partners:
OGF12288.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
OGF11197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
OGF04959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.706
OGF15186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.653
OGF12289.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
OGF12290.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
OGF12285.1
Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
 
     0.576
OGF13972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.572
OGF10582.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
OGF12286.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.493
Your Current Organism:
Eisenbacteria bacterium RBG167146
NCBI taxonomy Id: 1817856
Other names: C. Eisenbacteria bacterium RBG_16_71_46, Candidatus Eisenbacteria bacterium RBG_16_71_46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.